In addition, 21 sequences isolated during the outbreak of hand-foot-and-mouth disease in 2008 and 2009 were tested for intertype recombination events with SimPlot and Bootscan routines of the SimPlot software (Fig. 5). The window width and step size were set to 100 bp and 20 bp, respectively. This program is based on a sliding window method and is a way to graphically display the #links# coherence


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